`rna_library.structure.secstruct`¶

Module Contents¶

Classes¶

Represents a

class rna_library.structure.secstruct.SecStruct(secstruct, sequence)¶

Represents a

set_ids_(self, m)¶

Parameters: m (Motif) –

display(self)¶

property sequence(self)¶

property structure(self)¶

helix_replace_(self, id, secstruct, sequence)¶

motif_replace_(self, id, new_secstruct, new_sequence)¶

change_motif(self, id, new_secstruct, new_sequence)¶

get_sequence_structure(self)¶

_get_ids_internal(self, m, ids, mtype)¶

get_ids(self, motif_type)¶

get_motif(self, id)¶

Return type: Motif

get_substructure(self, id1, id2=None)¶

get(self, id)¶

__iter__(self)¶

itermotifs(self)¶

hairpins(self, **kwargs)¶

helix(self)¶

junctions(self)¶

singlestrands(self)¶

set_barcode(self, m_id, bc_seq)¶

__add__(self, other)¶